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  1. PhD Opportunity - Soil Microbial Ecology - QIIME 2 Forum

    Mar 23, 2023 · UTSA is a public research university and a Hispanic-Serving Institution located in scenic San Antonio, Texas. The main campus, where the graduate position will be housed, enrolls ~34,000 …

  2. how to reference the plugins used - QIIME 2 Forum

    Jan 8, 2022 · I wanted to ask if anyone can help me to know how to cite the qiime plugins (permanova, shannon, observed features, evenness, faith phylogenetic tree, braycurtis, scenic plugin, taxa …

  3. Topics tagged ancom-bc2

    Feb 26, 2026 · Topics tagged ancom-bc2 Topic Replies Views Activity da-barplot feature request Developer Discussion ancom-bc2 5 237 February 26, 2026 ANCOM-BC2 versions User Support …

  4. UBC Okanagan, Quantitative Ecology - QIIME 2 Forum

    Jul 10, 2019 · Situated in the heart of the Okanagan Valley, one of the most scenic regions in Canada, it offers an intimate learning environment and excellent opportunities for regional, national, and …

  5. Importing bins/mags into Qiime2 - Technical Support - QIIME 2 Forum

    Mar 31, 2025 · Dear devs, dear users I am processing metagenome dataset. I currently follow the q2-moshpit: A set of tutorials showcasing shotgun metagenomics analysis workflows, but I modified …

  6. Observed ASV richness drops after adding 3rd MiSeq library — why do …

    Oct 16, 2025 · Basubi: I merged library A + B → richness stays ~350 (fungi) / ~300 (bacteria). But when I merge library C with A+B the observed ASV richness drops for both kingdoms (I lose ≈100 ASVs for …

  7. qiime2R installation issue - Library Support - QIIME 2 Forum

    Feb 13, 2020 · I have a problem with the installation of package. Namely, when I try to install it using "devtools::install_github ("jbisanz/qiime2R" I get the following error:

  8. Can silva database be used in protist taxonomic assignment?

    Dec 3, 2025 · Hi, I want to profile the protist community in the rhizosphere, can I use silva database as listed following?

  9. Mitohelper: a Python-based mitochondrial reference sequence analysis ...

    Sep 21, 2021 · Introducing Mitohelper, a Python-based mitochondrial reference sequence analysis tool for fish eDNA studies. We built fish reference datasets for 1) all mitochondrial sequences, 2) COI …

  10. taxonomy mitochondria vs D_4__Mitochondria - General Discussion

    Apr 21, 2025 · Hi everyone, I have just finished going through my qiime2 analysis following the moving pictures and fecal sample tutorial (for merging). I have created my phyloseq object using the …